Get NIR Images¶

Gets NIR image that matches VIS image

plantcv.get_nir(path, filename)

returns nir_path

• Parameters:
  • path - path to base image (vis image) to match
  • filename - filename of base image (vis image) to match

• Context:

  • This is a function that is likely only useful for those with multiple camera types. We use this function to find the matching NIR image to a VIS image, that is found in the same directory but which contains multiple images (regex). Would need to be modified for different file naming structure / image types / file structures.

• Example use:

• Use in VIS/NIR Tutorial

from plantcv import plantcv as pcv

# Set global debug behavior to None (default), "print" (to file), or "plot" (Jupyter Notebooks or X11)
pcv.params.debug = "print"

# Get NIR image
nir_path= pcv.get_nir("/home/images/sorghum/snapshot1", "VIS_SV_90_z300_h1_g0_e85_v500_86939.png")