Process Results¶
Process a directory of results files from running PlantCV over as many images as needed and create a formatted, concatenated data output file.
plantcv.parallel.process_results(job_dir, json_file)
returns none
- Parameters:
- job_dir - Path of the job directory
- json_file - Path and name of the output combined json file
- Context:
- This step is built into the PlantCV Workflow Parallelization feature. Each image will likely print
hierarchical data files if
print_results
is a step in the workflow but theprocess_results
step takes place after all images have been analyzed and combines these single image data files into one text file that can be used as input for thejson2csv
function.
- This step is built into the PlantCV Workflow Parallelization feature. Each image will likely print
hierarchical data files if
- Example use:
- Below
from plantcv import parallel
# Read in image
parallel.process_results(job_dir="home/user/parallel_results", json_file="combined_output.txt")