Auto Crop

Crops image to an object and allows user to specify image padding (if desired)

plantcv.auto_crop(img, objects, padding_x=0, padding_y=0, color='black')

returns image after resizing

  • Parameters:
    • img1 - RGB or grayscale image data
    • object - contour of target object
    • padding_x - padding in the x direction
    • padding_y - padding in the y direction
    • color - either 'black' or 'white'
  • Context:
    • Crops image to object

Input image


from plantcv import plantcv as pcv

# Set global debug behavior to None (default), "print" (to file), or "plot" (Jupyter Notebooks or X11)

pcv.params.debug = "print"

# Resize image
crop_img=pcv.auto_crop(img, id_objects[0],20,20,'black')

Debug Auto Crop Images